dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04413
Location and strand information: 1806040 - 1807899 (-)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04414
Location and strand information: 1808160 - 1809506 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04415
Location and strand information: 1809624 - 1810499 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04416
Location and strand information: 1810496 - 1811317 (+)
Family: 3.A.1.1.42
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04417
Location and strand information: 1811314 - 1812177 (+)
Family: HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04418
Location and strand information: 1812292 - 1813575 (+)
Family: GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.195
Protein molecular weight: 49691.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04419
Location and strand information: 1814246 - 1816069 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04420
Location and strand information: 1816062 - 1817594 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04421
Location and strand information: 1817753 - 1819243 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04422
Location and strand information: 1819333 - 1820265 (+)
Family: 3.A.1.1.10
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04423
Location and strand information: 1820292 - 1821209 (+)
Family: 3.A.1.1.29
Protein type: TC
Protein description: Inner membrane ABC transporter permease protein YcjP

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04424
Location and strand information: 1821277 - 1823583 (+)
Family: GH3
Protein type: CAZyme
Protein description: Beta-glucosidase BoGH3B
Protein isoelectric point: 4.7142
Protein molecular weight: 82806.97
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04425
Location and strand information: 1823586 - 1826975 (+)
Family: GH38
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.146
Protein molecular weight: 126188.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04426
Location and strand information: 1827375 - 1828694 (+)
Family: GH125
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8274
Protein molecular weight: 50637.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04427
Location and strand information: 1828691 - 1831837 (+)
Family: GH5|GH0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.4711
Protein molecular weight: 115980.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002407_19|CGC22
Gene ID: MGYG000002407_04428
Location and strand information: 1831860 - 1834622 (+)
Family: GH38
Protein type: CAZyme
Protein description: Mannosylglycerate hydrolase
Protein isoelectric point: 5.027
Protein molecular weight: 102172.69
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002407_04418	GH29_e27\|3.2.1.51	hostglycan
MGYG000002407_04424	GH3_e22
MGYG000002407_04425	GH38_e14\|3.2.1.24	hostglycan
MGYG000002407_04426	GH125_e0
MGYG000002407_04427
MGYG000002407_04428	GH38_e0\|3.2.1.-	alpha-mannan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is alpha-mannan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002407_04413	hypothetical protein	TC	1806040	1807899	-	9.B.33.1.1
MGYG000002407_04414	hypothetical protein	STP	1808160	1809506	+	SBP_bac_1
MGYG000002407_04415	L-arabinose transport system permease protein AraP	TC	1809624	1810499	+	3.A.1.1.7
MGYG000002407_04416	L-arabinose transport system permease protein AraQ	TC	1810496	1811317	+	3.A.1.1.42
MGYG000002407_04417	HTH-type transcriptional activator RhaR	TF	1811314	1812177	+	HTH_AraC
MGYG000002407_04418	hypothetical protein	CAZyme	1812292	1813575	+	GH29
MGYG000002407_04419	hypothetical protein	TC	1814246	1816069	+	9.B.33.1.1
MGYG000002407_04420	Regulator of RpoS	TF	1816062	1817594	+	HTH_AraC+HTH_AraC
MGYG000002407_04421	hypothetical protein	STP	1817753	1819243	+	SBP_bac_1
MGYG000002407_04422	putative multiple-sugar transport system permease YteP	TC	1819333	1820265	+	3.A.1.1.10
MGYG000002407_04423	Inner membrane ABC transporter permease protein YcjP	TC	1820292	1821209	+	3.A.1.1.29
MGYG000002407_04424	Beta-glucosidase BoGH3B	CAZyme	1821277	1823583	+	GH3
MGYG000002407_04425	hypothetical protein	CAZyme	1823586	1826975	+	GH38
MGYG000002407_04426	hypothetical protein	CAZyme	1827375	1828694	+	GH125
MGYG000002407_04427	hypothetical protein	CAZyme	1828691	1831837	+	GH5\| GH0
MGYG000002407_04428	Mannosylglycerate hydrolase	CAZyme	1831860	1834622	+	GH38
Protein ID	Protein Name	Type	Start	End	Strand	Signature